PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000877369
Organism
Malus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family TCP
Protein Properties Length: 426aa    MW: 45457.6 Da    PI: 7.5327
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000877369genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP132.34.6e-4196213289
            TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                    ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s +        
  MDP0000877369  96 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPsqlrssyy 191
                    789******************************************************************999877777777775555544555555 PP

            TCP  89 .....................k 89 
                                         +
  MDP0000877369 192 spnfslhqnqrrxlfqgiglsS 213
                    5555555555444444444442 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.3E-40100237IPR005333Transcription factor, TCP
PROSITE profilePS5136927.923102156IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0031347Biological Processregulation of defense response
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MEGGDDHQLH HHHHHHHYQQ HQQQYHHRPN FPFQLLEKKE LDHQEAASCS NSTSPYPSLA  60
ITTVDPTANN NTSSTPAATT TSALQASSAE PSKKPPPKRT STKDRHTKVD GRGRRIRMPA  120
LCAARVFQLT RELGHKSDGE TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM  180
SVPSQLRSSY YSPNFSLHQN QRRXLFQGIG LSSSDSSSTL LNFQTNPMHA SMLQAKQELR  240
DTVSLDLSEA ASAGEGSMGG RKRRPPEQDL NQMGGGGGGG GGGYLLQSST GAVPASHPHS  300
QIPANFWMLA NSNNQVMSGD PIWTFPASVN NSGLYRGTMP GGLHFMNFPA PVTLLPSQQQ  360
LGGSGGGGGS NDGNNMSDGQ LNMLAGLNPY RHMSDTGVSD SQQASGSHSH HGGGDDRHDS  420
TSHHS*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.232890.0bud
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008374541.10.0PREDICTED: transcription factor TCP14-like
SwissprotQ93Z002e-61TCP14_ARATH; Transcription factor TCP14
TrEMBLM5WM860.0M5WM86_PRUPE; Uncharacterized protein
STRINGVIT_17s0000g06020.t011e-158(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21203280
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.14e-46TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14